Small Intestinal Bacterial Overgrowth (SIBO)
Small intestinal bacterial overgrowth (SIBO) occurs when bacteria overpopulate the small intestine, usually secondary to another underlying GI issue, causing digestive upset. It's typically mild to moderate and resolves within weeks of treatment, though it can recur if the underlying cause isn't addressed.

Written by Dr. Patty Khuly
Updated Jun 20, 2024
Severity
Mild to moderate
Onset
Any age
Duration
Weeks of treatment, can recur
Common causes
Bacterial overgrowth, often secondary to other GI disease
Summary
The upper part of the small intestine is responsible for the continued digestion of food as it exits the stomach and for the commencement of the process in which nutrients are absorbed. Bacteria normally aids in the process of breaking down the partially digested foodstuff within the intestines. In dogs, the overgrowth of this bacteria within the small intestine results in a common process descriptively labeled, “small intestinal bacterial overgrowth” or “SIBO.”
It’s a big problem for some dogs, and it occurs for a variety of reasons:
1. Ileus. When normal peristaltic waves moving the partially digested foodstuff forward aren’t present, bacterial populations increase. Neurologic problems, gastrointestinal obstruction, pancreatitis, peritonitis, parasitism and other processes can all cause the lack of forward intestinal movement we call “ileus.”
2. Too much foodstuff. This can happen when digestion and absorption is impaired, as with exocrine pancreatic insufficiency and other disorders that lead to poor digestion and absorption of nutrients.
3. Malnutrition. When the body’s overall condition is adversely affected, all the normal defenses can break down, leading to uncontrolled bacterial growth.
The above tend to be labeled “secondary” causes of SIBO. But SIBO can also be “idiopathic,” which means we don’t understand the exact mechanism by which it happens. In dogs, this problem is believed to be hereditary.
Symptoms and Identification
Diarrhea and flatulence are the most common signs of SIBO. Chronic, intermittent diarrhea is most typical of the idiopathic form, with many dogs also suffering weight loss, stunted growth and/or generalized unthriftiness. Some dogs may appear inordinately hungry and may even engage in pica or stool consumption. You might be reading this article now because you saw your dog eating his or other dogs' poop.
SIBO is easily identified by noting small bowel diarrhea (characterized by limited straining and its large volumes) and finding large numbers of bacteria in the fecal material. Diagnosis of the idiopathic form is aimed primarily at ruling out all potential causes of secondary SIBO. Because these are numerous, the process usually involves X-rays, serial fecal examination (not cultures, which are notoriously unreliable), and sometimes endoscopy to test the upper part of the small intestine for high bacterial counts.
Blood tests for the vitamins known as folate and cobalamine are also indicative of the process. High folate levels and decreased cobalamine typically result. That’s because folate is synthesized by the bacteria, and cobalamine is bound by them.
Affected Breeds
German Shepherd Dogs are overrepresented among those who suffer the idiopathic, hereditary form of this disease. Apart from GSDs, other young, large breed dogs are most frequently affected.
Secondary SIBO can occur in any dog of any breed.
Treatment
Treating the underlying process is the approach best undertaken for secondary SIBO. For idiopathic SIBO, it’s clear that antibiotics are highly effective in helping owners manage their dogs’ clinical signs. That’s why this version of the disease is often referred to as “antibiotic-responsive SIBO.”
Veterinary Cost
Though antibiotics are not very expensive in and of themselves, diagnosing idiopathic SIBO by ruling out all other causes can be time consuming and expensive, especially if endoscopy is elected (this can easily cost between $500 to $1,000). Therefore, it’s not unusual for a careful diagnostic plan undertaken by a specialist to run well over $1,000.
For secondary SIBO, the expense of the disease depends on similar factors: How hard is it to identify the root cause? If the cause is simple and easily identified (parasites, for example), then the process can be eliminated quickly and inexpensively. But if an intestinal obstruction is the cause, surgery to repair it can run into the thousands of dollars.
Prevention
Though we don’t understand the mode of inheritance, dogs identified as having idiopathic SIBO should be removed from all breeding programs to eliminate the risk of passing on this hereditary trait.
References
Textbook of Veterinary Internal Medicine: Disease of the dog and cat, 5th edition, eds. Ettinger and Feldman, pp 1223-1228.
Small Animal Medicine, eds. Nelson and Couto, pp 453.
Strombeck's Small Animal Gastroenterology, third edition, eds. Guilford, Center, Strombeck, Williams, and Meyer, pp 370-373.
More resources
Does pet insurance cover Small Intestinal Bacterial Overgrowth (SIBO)?
Pet insurance is built for the unexpected, covering new conditions that develop after coverage begins and the care that comes with them. If your pet has a history of Small Intestinal Bacterial Overgrowth (SIBO), it may be considered pre-existing. But Embrace takes a second look at some pre-existing conditions and if your pet stays symptom- and treatment-free for 12 months they may still be covered.
Let’s get your pet covered
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